CDS

Accession Number TCMCG017C15207
gbkey CDS
Protein Id OMO92922.1
Location complement(join(47917..48092,48272..48303,48393..48487,48804..48877,48970..49081,49200..49329,49473..49603,49683..49820,49939..50054,50153..50318,50419..50532,50628..50690,50831..50938,51273..51441,51569..51666,51751..51848,51935..52071,52185..52403,52477..52682,52791..53027))
GeneID InterPro:IPR003100
Organism Corchorus olitorius
locus_tag COLO4_17198

Protein

Length 872aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016319.1
Definition Argonaute/Dicer protein, PAZ [Corchorus olitorius]
Locus_tag COLO4_17198

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the argonaute family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11593        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000791        [VIEW IN EMBL-EBI]
GO:0002252        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005719        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009554        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009816        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010528        [VIEW IN EMBL-EBI]
GO:0010529        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0016032        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019048        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031048        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034293        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035197        [VIEW IN EMBL-EBI]
GO:0035198        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043934        [VIEW IN EMBL-EBI]
GO:0044003        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048236        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048533        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051567        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061647        [VIEW IN EMBL-EBI]
GO:0061980        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0070919        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080188        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1904159        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCACTTGAGTCAGATGGAAATGGGGCAGCAGGGGATCCTCTGCCTCCTCCACCCCCTCTTCCTCTGAATGTGGTACCAATCAAGGCAGAATCTGAACCTGCCAAGAAGAAAACTGCACGGGTTCCTATGGCTAGACGAGGCCTTGGATCTAAGGGGCAGAAGGTATCAGTTCTTACCAATCACTTCAAGGTGAATGTGGGAAATGTAGATGGACACTTCTACCATTACAGTATTTCTCTTTCCTATGAAGACGGTCGCCCAGTTGATGGCAAGGGTGTTGGAAGAAAAGTAATTGATAGGCTGCATGAGACTTATAGCAGTGAGCTGGCTGGCAAGGACTTTGCATATGATGGGGAGAAGAGCTTATTTACTGTTGGTCCTCTTCCAGATAACAAAAATGAGTTCATGGTTGTACTTGAGGATGTTACTTCTAACAGGAACAATGGAAATGCCAATGGCCATGACAGCCCTAATGAAAATGATCGCAAGAGATTAAGGCGGCCATATCAGTCAAAGACCTTTCTGGTGGCGATTAGCTTTGCAGCCAAGATTCCCATGCAAGCCATTCAAAATGCTTTGCATGGACAGGAATCAGAAAACTCACAAGAAGCACTGAGGGTCTTGGACATCATTTTAAGGCAAAATGCAGCTAAACAGGGATGCCTACTTGTTCGCCAATCATTCTTCCAGAATGATCCAGCTAATTTTGTACCCATTGGAGGTGGTGTTTTAGGCTGCAGGGGTTTCCACTCAAGTTTCAGAACTAGTCAAGGAGGCCTCTCATTGAACATTGATGTATCAACTACAATGATAATTCAACCTGGTCCAGTAGTCGACTTCTTGATTAGTAATCAAAATGCTAGAGATCCTTTCTCCCTTGATTGGTCCAAGGCTAAACGTGTGCTTAAGAATCTGAGGATAAAAGTCATTCCATCCAATCAGGAGCATAAGATTACTGGACTGAGCAAGCAAATATGCCGAGAACAGATGTTTTCAATGAAGCAGAAAAGTAAGACTAGTGACGGTGAAGCTGAGACTCTGGACATTACGGTTTATGACTATTTTGTTAACCACCGCAACATACAGTTGCAGTATTCTGGTGATCTACCATGCATTAATGTTGGGAAGCCAAAGCGGCCAACTTATATTCCTATTGAGGCTTTGCGGAATAGTAACTATGGTGCTGATCCAATGCTGCGATCATGTGGTGTTTCTATCAGCTCTAGTTTTACCCAAGTGGAGGGGCGTGTTCTGCCAGCTCCAAAGTTAAAAATGGGCAATGGAGAAGAATTGTTTCCACGGAATGGGCGATGGAATTTCAACAATAAGAAATTCATGGAGCCGACTAAGATTGAACGATGGGCTGTTGTTAACTTCTCAGCACGTTGTGATGTACGTAGACTTGTGCAGGATCTTACCAGATGTGCACATATGAAAGGAATTCGCATTGATCCTCCATTTGATGTGTTTGAGGAGAGCAATCAGAACAGACGTCTATCTCCTGTGCTTAGAGTGGAGAAGATGTTTGATGACATTCAATCCAAGCTTCCTGGAGCTCCACAATTCCTTCTCTGTCTGCTGCCTGAAAGGAAAAATTCTGATCATTATGGTCCATGGAAACGAAAGCATCTGGCTGAGTTTGATATAGTCACTCAATGTATGTCTCCCACTCCTAGGATTAATGATCAGTACCTGACTAATCTGCTACTCAAGATCAATGCTAAGCTTGGAGGACTCTGTTCTATGTTAGCAATTGAACGAACGCCTGCACTCCCTGTTGTTTCTAAGCTACCGACTATAATCCTTGGAATGGATGTGTCCCATGGTTCCCCTGGGCATTCTGATGTCCCATCTATAGCTGCGGTGGTTAGCTCCAGGCAGTGGCCTTCGATCTCTCGTTATAGGGCATCTGTACGCACACAGTCGCCTAAAGTTGAGATGATAGACTCTCTTTTCAAAAGAGTGTCTGAGAAGGAGGATGATGGAATCATCAGGGAACTTCTATTGGACTTTTATACAAGTTCAGGAAAGAGAAAGCCTGATCAGATCATAATATTCCGGGATGGTGTCAGTGAGTCCCAATTCAATCAAGTTCTGAATGTTGAACTTGATCAGATCATCGAGGCGTGCAAGTTTCTTGATGAGAACTGGGACCCAAAGTTTGTGGTAATTGTAGCCCAGAAAAATCATCATACCAAGTTTTTCCTGCAAAATTCTCCAGACAATGTTCAGCCTGGAACTGTGATTGACAACAAAATTTGTCATCCGAAGAACAATGACTTCTACCTTTGTGCACATGCAGGAATGATTGGAACTACAAGGCCTACTCATTACCATGTTCTGCTAGATCAAATTGGGTTTTCTCCCGACGATCTTCAAGAGCTTGTCCATTCTCTTTCATACGTGTATCAAAGGAGCACAACTGCCATATCTGTTGTTGCTCCTATTTGCTATGCACATTTGGCAGCTGCCCAGTTGGGTACATACATGAAGTTCGAAGATGCATCTGAGACATCCTCCAGCCATGGTGGGGTGACTGCTCCCGGTGCTGTTCCTGTCCCGCAGCTGCCTAAGTTGAAGGAGAAGGTCTGCAGTTCTATGTTTTTCTGCTGA
Protein:  
MDPLESDGNGAAGDPLPPPPPLPLNVVPIKAESEPAKKKTARVPMARRGLGSKGQKVSVLTNHFKVNVGNVDGHFYHYSISLSYEDGRPVDGKGVGRKVIDRLHETYSSELAGKDFAYDGEKSLFTVGPLPDNKNEFMVVLEDVTSNRNNGNANGHDSPNENDRKRLRRPYQSKTFLVAISFAAKIPMQAIQNALHGQESENSQEALRVLDIILRQNAAKQGCLLVRQSFFQNDPANFVPIGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLISNQNARDPFSLDWSKAKRVLKNLRIKVIPSNQEHKITGLSKQICREQMFSMKQKSKTSDGEAETLDITVYDYFVNHRNIQLQYSGDLPCINVGKPKRPTYIPIEALRNSNYGADPMLRSCGVSISSSFTQVEGRVLPAPKLKMGNGEELFPRNGRWNFNNKKFMEPTKIERWAVVNFSARCDVRRLVQDLTRCAHMKGIRIDPPFDVFEESNQNRRLSPVLRVEKMFDDIQSKLPGAPQFLLCLLPERKNSDHYGPWKRKHLAEFDIVTQCMSPTPRINDQYLTNLLLKINAKLGGLCSMLAIERTPALPVVSKLPTIILGMDVSHGSPGHSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDSLFKRVSEKEDDGIIRELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQVLNVELDQIIEACKFLDENWDPKFVVIVAQKNHHTKFFLQNSPDNVQPGTVIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLLDQIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTYMKFEDASETSSSHGGVTAPGAVPVPQLPKLKEKVCSSMFFC